Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBQ06643 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBQ06643 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBQ06643 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.02□□□□□ -0.17
LTBQ06643 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBQ06643 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.02□□□□□ -0.17
LTBQ06643 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.02□□□□□ -0.17
LTBQ06643 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.02□□□□□ -0.17
LTBQ06643 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.02□□□□□ -0.17
LTBQ06643 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBQ06643 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LTBQ06643 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LTBQ06643 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBQ06643 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
LTBQ06643 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBQ06643 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LTBQ06643 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBQ06643 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBQ06643 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 AC097376.2-205ENST00000610159 5334 ntBASIC14.01□□□□□ -0.17
LTBQ06643 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.01□□□□□ -0.17
LTBQ06643 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 AL133338.1-201ENST00000565695 1517 ntBASIC14.01□□□□□ -0.17
LTBQ06643 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
LTBQ06643 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.01□□□□□ -0.17
LTBQ06643 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBQ06643 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBQ06643 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBQ06643 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBQ06643 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.01□□□□□ -0.17
LTBQ06643 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBQ06643 FAM8A2P-201ENST00000528813 1142 ntBASIC14.01□□□□□ -0.17
LTBQ06643 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
LTBQ06643 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.01□□□□□ -0.17
LTBQ06643 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBQ06643 AC025181.2-201ENST00000606994 802 ntBASIC14.01□□□□□ -0.17
LTBQ06643 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 AC004840.1-201ENST00000636359 365 ntBASIC14.01□□□□□ -0.17
LTBQ06643 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LTBQ06643 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LTBQ06643 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.01□□□□□ -0.17
LTBQ06643 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LTBQ06643 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LTBQ06643 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LTBQ06643 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 CYP2AB1P-202ENST00000454440 1456 ntBASIC14□□□□□ -0.17
LTBQ06643 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14□□□□□ -0.17
LTBQ06643 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14□□□□□ -0.17
LTBQ06643 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
LTBQ06643 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14□□□□□ -0.17
LTBQ06643 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14□□□□□ -0.17
LTBQ06643 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14□□□□□ -0.17
LTBQ06643 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LTBQ06643 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LTBQ06643 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LTBQ06643 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14□□□□□ -0.17
LTBQ06643 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14□□□□□ -0.17
LTBQ06643 AL589987.1-201ENST00000453380 819 ntBASIC14□□□□□ -0.17
LTBQ06643 SPDYE18-201ENST00000510091 1050 ntBASIC14□□□□□ -0.17
LTBQ06643 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LTBQ06643 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14□□□□□ -0.17
LTBQ06643 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14□□□□□ -0.17
LTBQ06643 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14□□□□□ -0.17
LTBQ06643 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
LTBQ06643 MIR4525-201ENST00000580000 75 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms