Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FAM45BP-202ENST00000592932 1624 ntBASIC16.12■□□□□ 0.17
USP46P62068 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
USP46P62068 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
USP46P62068 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
USP46P62068 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
USP46P62068 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
USP46P62068 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.11■□□□□ 0.17
USP46P62068 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.11■□□□□ 0.17
USP46P62068 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
USP46P62068 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.11■□□□□ 0.17
USP46P62068 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.11■□□□□ 0.17
USP46P62068 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 HLA-V-201ENST00000429037 534 ntBASIC16.11■□□□□ 0.17
USP46P62068 CSF2RBP1-201ENST00000447905 391 ntBASIC16.11■□□□□ 0.17
USP46P62068 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
USP46P62068 AC004066.1-201ENST00000502488 802 ntBASIC16.11■□□□□ 0.17
USP46P62068 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.11■□□□□ 0.17
USP46P62068 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.11■□□□□ 0.17
USP46P62068 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.11■□□□□ 0.17
USP46P62068 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.11■□□□□ 0.17
USP46P62068 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.11■□□□□ 0.17
USP46P62068 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.11■□□□□ 0.17
USP46P62068 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.11■□□□□ 0.17
USP46P62068 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.11■□□□□ 0.17
USP46P62068 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.11■□□□□ 0.17
USP46P62068 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
USP46P62068 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
USP46P62068 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP46P62068 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
USP46P62068 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
USP46P62068 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.1■□□□□ 0.17
USP46P62068 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
USP46P62068 AC020658.6-201ENST00000623564 1870 ntBASIC16.1■□□□□ 0.17
USP46P62068 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
USP46P62068 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.1■□□□□ 0.17
USP46P62068 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
USP46P62068 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
USP46P62068 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.1■□□□□ 0.17
USP46P62068 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 AC026954.1-201ENST00000429771 1293 ntBASIC16.1■□□□□ 0.17
USP46P62068 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.1■□□□□ 0.17
USP46P62068 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.1■□□□□ 0.17
USP46P62068 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
USP46P62068 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.1■□□□□ 0.17
USP46P62068 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.1■□□□□ 0.17
USP46P62068 SAMD11P1-201ENST00000571429 661 ntBASIC16.1■□□□□ 0.17
USP46P62068 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.1■□□□□ 0.17
USP46P62068 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.1■□□□□ 0.17
USP46P62068 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.1■□□□□ 0.17
USP46P62068 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.1■□□□□ 0.17
USP46P62068 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
USP46P62068 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.1■□□□□ 0.17
USP46P62068 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
USP46P62068 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.1■□□□□ 0.17
USP46P62068 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.1■□□□□ 0.17
USP46P62068 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.1■□□□□ 0.17
USP46P62068 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.1■□□□□ 0.17
USP46P62068 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP46P62068 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP46P62068 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.09■□□□□ 0.17
USP46P62068 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP46P62068 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP46P62068 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.09■□□□□ 0.17
USP46P62068 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.09■□□□□ 0.17
USP46P62068 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.09■□□□□ 0.17
USP46P62068 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP46P62068 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms