Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 CNN2P11-201ENST00000429351 262 ntBASIC13.35□□□□□ -0.27
ATP1B3P54709 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.35□□□□□ -0.27
ATP1B3P54709 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.35□□□□□ -0.27
ATP1B3P54709 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ATP1B3P54709 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.35□□□□□ -0.27
ATP1B3P54709 AC092865.5-201ENST00000545435 363 ntBASIC13.35□□□□□ -0.27
ATP1B3P54709 AL512356.2-201ENST00000546955 174 ntBASIC13.35□□□□□ -0.27
ATP1B3P54709 SNHG9-202ENST00000564014 471 ntBASIC13.35□□□□□ -0.27
ATP1B3P54709 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.35□□□□□ -0.27
ATP1B3P54709 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.35□□□□□ -0.27
ATP1B3P54709 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.35□□□□□ -0.27
ATP1B3P54709 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.35□□□□□ -0.27
ATP1B3P54709 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ATP1B3P54709 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.35□□□□□ -0.27
ATP1B3P54709 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.35□□□□□ -0.27
ATP1B3P54709 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.35□□□□□ -0.27
ATP1B3P54709 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.35□□□□□ -0.27
ATP1B3P54709 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.35□□□□□ -0.27
ATP1B3P54709 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ATP1B3P54709 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ATP1B3P54709 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.34□□□□□ -0.27
ATP1B3P54709 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.34□□□□□ -0.27
ATP1B3P54709 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ATP1B3P54709 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.34□□□□□ -0.27
ATP1B3P54709 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.34□□□□□ -0.27
ATP1B3P54709 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.34□□□□□ -0.27
ATP1B3P54709 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.34□□□□□ -0.27
ATP1B3P54709 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 AL033527.5-202ENST00000641632 1098 ntBASIC13.34□□□□□ -0.27
ATP1B3P54709 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
ATP1B3P54709 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 ZBED1P1-201ENST00000502364 1930 ntBASIC13.34□□□□□ -0.27
ATP1B3P54709 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.34□□□□□ -0.27
ATP1B3P54709 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.34□□□□□ -0.27
ATP1B3P54709 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.34□□□□□ -0.27
ATP1B3P54709 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ATP1B3P54709 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ATP1B3P54709 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ATP1B3P54709 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.33□□□□□ -0.27
ATP1B3P54709 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ATP1B3P54709 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ATP1B3P54709 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ATP1B3P54709 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ATP1B3P54709 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.33□□□□□ -0.27
ATP1B3P54709 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ATP1B3P54709 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
ATP1B3P54709 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ATP1B3P54709 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.33□□□□□ -0.28
ATP1B3P54709 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.33□□□□□ -0.28
ATP1B3P54709 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ATP1B3P54709 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ATP1B3P54709 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
ATP1B3P54709 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms