Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2AP49459 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2AP49459 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2AP49459 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2AP49459 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2AP49459 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC9.79□□□□□ -0.84
UBE2AP49459 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2AP49459 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC9.79□□□□□ -0.84
UBE2AP49459 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
UBE2AP49459 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC9.79□□□□□ -0.84
UBE2AP49459 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2AP49459 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2AP49459 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC9.79□□□□□ -0.84
UBE2AP49459 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2AP49459 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBE2AP49459 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
UBE2AP49459 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 AC127383.1-201ENST00000444697 1800 ntBASIC9.78□□□□□ -0.84
UBE2AP49459 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 RPL30-202ENST00000396070 440 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 AL645939.2-201ENST00000427340 991 ntBASIC9.78□□□□□ -0.84
UBE2AP49459 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 SERBP1P3-201ENST00000459980 809 ntBASIC9.78□□□□□ -0.84
UBE2AP49459 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 YBX1P5-201ENST00000509441 847 ntBASIC9.78□□□□□ -0.84
UBE2AP49459 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC9.78□□□□□ -0.84
UBE2AP49459 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC9.78□□□□□ -0.84
UBE2AP49459 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
UBE2AP49459 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
UBE2AP49459 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
UBE2AP49459 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBE2AP49459 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBE2AP49459 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2AP49459 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2AP49459 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2AP49459 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC9.77□□□□□ -0.84
UBE2AP49459 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2AP49459 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC9.77□□□□□ -0.84
UBE2AP49459 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC9.77□□□□□ -0.84
UBE2AP49459 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2AP49459 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC9.77□□□□□ -0.84
UBE2AP49459 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2AP49459 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC9.77□□□□□ -0.84
UBE2AP49459 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2AP49459 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC9.77□□□□□ -0.84
UBE2AP49459 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBE2AP49459 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC9.77□□□□□ -0.85
UBE2AP49459 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms