Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.12□□□□□ -0.15
SLC9A3P48764 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
SLC9A3P48764 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC9A3P48764 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC9A3P48764 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC9A3P48764 SLED1-202ENST00000512051 380 ntBASIC14.12□□□□□ -0.15
SLC9A3P48764 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC9A3P48764 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.12□□□□□ -0.15
SLC9A3P48764 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC9A3P48764 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC9A3P48764 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SLC9A3P48764 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC9A3P48764 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
SLC9A3P48764 CETN4P-206ENST00000642099 2168 ntBASIC14.12□□□□□ -0.15
SLC9A3P48764 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC9A3P48764 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC9A3P48764 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC9A3P48764 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC9A3P48764 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SLC9A3P48764 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
SLC9A3P48764 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SLC9A3P48764 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
SLC9A3P48764 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC9A3P48764 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC9A3P48764 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 AL512356.2-201ENST00000546955 174 ntBASIC14.11□□□□□ -0.15
SLC9A3P48764 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC9A3P48764 MIR4453-201ENST00000584019 89 ntBASIC14.11□□□□□ -0.15
SLC9A3P48764 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC9A3P48764 AL589739.1-201ENST00000607720 493 ntBASIC14.11□□□□□ -0.15
SLC9A3P48764 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC9A3P48764 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 Z97205.2-201ENST00000564697 1639 ntBASIC14.11□□□□□ -0.15
SLC9A3P48764 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC9A3P48764 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC9A3P48764 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SLC9A3P48764 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SLC9A3P48764 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC9A3P48764 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SLC9A3P48764 AC138969.2-201ENST00000532739 9932 ntBASIC14.1□□□□□ -0.15
SLC9A3P48764 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms