Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CSNK1DP48730 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CSNK1DP48730 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1DP48730 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CSNK1DP48730 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1DP48730 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1DP48730 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 FTLP10-202ENST00000505798 471 ntBASIC15.25■□□□□ 0.03
CSNK1DP48730 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CSNK1DP48730 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CSNK1DP48730 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1DP48730 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.25■□□□□ 0.03
CSNK1DP48730 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.25■□□□□ 0.03
CSNK1DP48730 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1DP48730 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.25■□□□□ 0.03
CSNK1DP48730 AC004466.1-201ENST00000599515 1080 ntBASIC15.25■□□□□ 0.03
CSNK1DP48730 AL359881.2-201ENST00000602973 570 ntBASIC15.25■□□□□ 0.03
CSNK1DP48730 AC133552.6-201ENST00000613406 534 ntBASIC15.25■□□□□ 0.03
CSNK1DP48730 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.25■□□□□ 0.03
CSNK1DP48730 AC138466.3-201ENST00000619983 221 ntBASIC15.25■□□□□ 0.03
CSNK1DP48730 AC138951.2-201ENST00000623455 1161 ntBASIC15.25■□□□□ 0.03
CSNK1DP48730 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1DP48730 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.25■□□□□ 0.03
CSNK1DP48730 AC008687.7-202ENST00000637404 953 ntBASIC15.25■□□□□ 0.03
CSNK1DP48730 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1DP48730 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CSNK1DP48730 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.25■□□□□ 0.03
CSNK1DP48730 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CSNK1DP48730 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CSNK1DP48730 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CSNK1DP48730 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CSNK1DP48730 AC091951.1-201ENST00000512854 2465 ntBASIC15.24■□□□□ 0.03
CSNK1DP48730 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1DP48730 CLUHP2-201ENST00000426660 1303 ntBASIC15.24■□□□□ 0.03
CSNK1DP48730 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1DP48730 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CSNK1DP48730 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CSNK1DP48730 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1DP48730 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 MIR658-201ENST00000385210 100 ntBASIC15.24■□□□□ 0.03
CSNK1DP48730 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1DP48730 TLE1P1-201ENST00000422965 589 ntBASIC15.24■□□□□ 0.03
CSNK1DP48730 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.24■□□□□ 0.03
CSNK1DP48730 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1DP48730 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1DP48730 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.24■□□□□ 0.03
CSNK1DP48730 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.24■□□□□ 0.03
CSNK1DP48730 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.24■□□□□ 0.03
CSNK1DP48730 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1DP48730 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.24■□□□□ 0.03
CSNK1DP48730 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CSNK1DP48730 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 AC023090.2-201ENST00000625182 2110 ntBASIC15.23■□□□□ 0.03
CSNK1DP48730 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CSNK1DP48730 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.23■□□□□ 0.03
CSNK1DP48730 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CSNK1DP48730 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms