Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 QARS-202ENST00000414533 2412 ntTSL 2 BASIC10.08□□□□□ -0.8
PCP4P48539 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC10.08□□□□□ -0.8
PCP4P48539 LINC01446-201ENST00000380970 3484 ntTSL 2 BASIC10.08□□□□□ -0.8
PCP4P48539 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC10.08□□□□□ -0.8
PCP4P48539 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 MAP3K7-204ENST00000369329 4911 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 WASH2P-201ENST00000453662 1684 ntBASIC10.08□□□□□ -0.8
PCP4P48539 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 USB1-207ENST00000563149 1751 ntTSL 2 BASIC10.08□□□□□ -0.8
PCP4P48539 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
PCP4P48539 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.08□□□□□ -0.8
PCP4P48539 CNGB1-204ENST00000564448 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC10.08□□□□□ -0.8
PCP4P48539 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
PCP4P48539 IGSF9B-201ENST00000321016 4050 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 IKBKB-230ENST00000629753 4069 ntTSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 UBR5-AS1-201ENST00000499653 2048 ntTSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 TTI2-201ENST00000360742 2242 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 SEMA4A-205ENST00000368286 3135 ntTSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 NOL10-205ENST00000538384 3418 ntTSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 AC087741.1-201ENST00000570309 4399 ntBASIC10.07□□□□□ -0.8
PCP4P48539 DNMT3B-201ENST00000201963 4255 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 AC080112.4-201ENST00000623156 2491 ntBASIC10.07□□□□□ -0.8
PCP4P48539 PAX8-AS1-205ENST00000437551 2390 ntTSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 AC023830.2-201ENST00000563704 1662 ntBASIC10.07□□□□□ -0.8
PCP4P48539 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 PRR5L-201ENST00000378867 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 PFN2-211ENST00000489155 636 ntTSL 4 BASIC10.07□□□□□ -0.8
PCP4P48539 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC10.07□□□□□ -0.8
PCP4P48539 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 EDRF1-202ENST00000356792 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 DIS3L2-204ENST00000409307 2658 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
PCP4P48539 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 TMEM196-201ENST00000405764 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
PCP4P48539 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
PCP4P48539 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 AC107892.1-201ENST00000577382 2727 ntTSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 AFAP1L1-201ENST00000296721 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
PCP4P48539 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 IL36RN-201ENST00000346807 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
PCP4P48539 AC090643.2-201ENST00000623442 2029 ntBASIC10.06□□□□□ -0.8
PCP4P48539 PLEKHG6-204ENST00000449001 3111 ntTSL 2 BASIC10.06□□□□□ -0.8
PCP4P48539 NLRX1-203ENST00000409265 3665 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms