Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NR4A2P43354 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NR4A2P43354 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 AC089987.1-201ENST00000551654 2209 ntBASIC14.03□□□□□ -0.16
NR4A2P43354 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
NR4A2P43354 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NR4A2P43354 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NR4A2P43354 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NR4A2P43354 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NR4A2P43354 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NR4A2P43354 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NR4A2P43354 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NR4A2P43354 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NR4A2P43354 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NR4A2P43354 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.02□□□□□ -0.16
NR4A2P43354 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NR4A2P43354 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NR4A2P43354 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.02□□□□□ -0.16
NR4A2P43354 AC112693.3-201ENST00000624819 1983 ntBASIC14.02□□□□□ -0.16
NR4A2P43354 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.02□□□□□ -0.16
NR4A2P43354 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
NR4A2P43354 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.02□□□□□ -0.16
NR4A2P43354 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NR4A2P43354 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.02□□□□□ -0.16
NR4A2P43354 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
NR4A2P43354 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NR4A2P43354 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.02□□□□□ -0.17
NR4A2P43354 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.02□□□□□ -0.17
NR4A2P43354 HAUS4P1-201ENST00000406739 1145 ntBASIC14.02□□□□□ -0.17
NR4A2P43354 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.02□□□□□ -0.17
NR4A2P43354 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NR4A2P43354 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.02□□□□□ -0.17
NR4A2P43354 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
NR4A2P43354 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
NR4A2P43354 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NR4A2P43354 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.02□□□□□ -0.17
NR4A2P43354 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.02□□□□□ -0.17
NR4A2P43354 AC008267.7-201ENST00000624570 1194 ntBASIC14.02□□□□□ -0.17
NR4A2P43354 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.02□□□□□ -0.17
NR4A2P43354 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
NR4A2P43354 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
NR4A2P43354 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NR4A2P43354 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.02□□□□□ -0.17
NR4A2P43354 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NR4A2P43354 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.02□□□□□ -0.17
NR4A2P43354 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NR4A2P43354 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.02□□□□□ -0.17
NR4A2P43354 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR4A2P43354 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
NR4A2P43354 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NR4A2P43354 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
NR4A2P43354 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR4A2P43354 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NR4A2P43354 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.01□□□□□ -0.17
NR4A2P43354 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NR4A2P43354 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NR4A2P43354 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.01□□□□□ -0.17
NR4A2P43354 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
NR4A2P43354 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR4A2P43354 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.01□□□□□ -0.17
NR4A2P43354 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.01□□□□□ -0.17
NR4A2P43354 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR4A2P43354 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.01□□□□□ -0.17
NR4A2P43354 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.01□□□□□ -0.17
NR4A2P43354 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NR4A2P43354 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms