Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A3P43003 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A3P43003 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC1A3P43003 GHSR-202ENST00000427970 912 ntBASIC14.12□□□□□ -0.15
SLC1A3P43003 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC1A3P43003 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A3P43003 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SLC1A3P43003 RNA5SP421-201ENST00000516864 134 ntBASIC14.12□□□□□ -0.15
SLC1A3P43003 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A3P43003 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.12□□□□□ -0.15
SLC1A3P43003 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC1A3P43003 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A3P43003 AC004840.1-201ENST00000636359 365 ntBASIC14.12□□□□□ -0.15
SLC1A3P43003 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SLC1A3P43003 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC1A3P43003 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.12□□□□□ -0.15
SLC1A3P43003 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SLC1A3P43003 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLC1A3P43003 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLC1A3P43003 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SLC1A3P43003 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SLC1A3P43003 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.12□□□□□ -0.15
SLC1A3P43003 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
SLC1A3P43003 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SLC1A3P43003 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 AL365209.1-201ENST00000624418 6473 ntBASIC14.11□□□□□ -0.15
SLC1A3P43003 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SLC1A3P43003 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC1A3P43003 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC1A3P43003 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC1A3P43003 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC1A3P43003 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 AC011467.4-201ENST00000594891 528 ntBASIC14.11□□□□□ -0.15
SLC1A3P43003 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.11□□□□□ -0.15
SLC1A3P43003 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.11□□□□□ -0.15
SLC1A3P43003 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SLC1A3P43003 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.11□□□□□ -0.15
SLC1A3P43003 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SLC1A3P43003 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
SLC1A3P43003 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A3P43003 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 WASH3P-207ENST00000560956 1394 ntBASIC14.1□□□□□ -0.15
SLC1A3P43003 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A3P43003 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms