Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACKR3P25106 AP000845.1-201ENST00000581677 2131 ntBASIC13.36□□□□□ -0.27
ACKR3P25106 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACKR3P25106 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.36□□□□□ -0.27
ACKR3P25106 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACKR3P25106 AC013726.1-201ENST00000563747 2285 ntBASIC13.36□□□□□ -0.27
ACKR3P25106 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
ACKR3P25106 LINC01101-201ENST00000622953 1884 ntBASIC13.36□□□□□ -0.27
ACKR3P25106 AC138969.3-201ENST00000546612 1459 ntBASIC13.36□□□□□ -0.27
ACKR3P25106 AC138932.2-201ENST00000548268 1459 ntBASIC13.36□□□□□ -0.27
ACKR3P25106 AC126755.4-201ENST00000549796 1459 ntBASIC13.36□□□□□ -0.27
ACKR3P25106 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ACKR3P25106 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 WASH3P-207ENST00000560956 1394 ntBASIC13.35□□□□□ -0.27
ACKR3P25106 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.35□□□□□ -0.27
ACKR3P25106 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ACKR3P25106 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.35□□□□□ -0.27
ACKR3P25106 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.35□□□□□ -0.27
ACKR3P25106 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ACKR3P25106 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.35□□□□□ -0.27
ACKR3P25106 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.35□□□□□ -0.27
ACKR3P25106 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.35□□□□□ -0.27
ACKR3P25106 AC009477.1-201ENST00000452936 217 ntBASIC13.35□□□□□ -0.27
ACKR3P25106 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.35□□□□□ -0.27
ACKR3P25106 IGHV3-42-201ENST00000520410 361 ntBASIC13.35□□□□□ -0.27
ACKR3P25106 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.35□□□□□ -0.27
ACKR3P25106 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.35□□□□□ -0.27
ACKR3P25106 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.35□□□□□ -0.27
ACKR3P25106 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 AC004461.2-201ENST00000629517 803 ntBASIC13.35□□□□□ -0.27
ACKR3P25106 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.35□□□□□ -0.27
ACKR3P25106 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.35□□□□□ -0.27
ACKR3P25106 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACKR3P25106 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ACKR3P25106 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 AC007292.2-201ENST00000593524 1812 ntBASIC13.34□□□□□ -0.27
ACKR3P25106 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.34□□□□□ -0.27
ACKR3P25106 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.34□□□□□ -0.27
ACKR3P25106 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.34□□□□□ -0.27
ACKR3P25106 AC241585.1-201ENST00000433527 519 ntBASIC13.34□□□□□ -0.27
ACKR3P25106 AC114501.2-201ENST00000439631 535 ntBASIC13.34□□□□□ -0.27
ACKR3P25106 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 AC009407.1-201ENST00000568958 598 ntBASIC13.34□□□□□ -0.27
ACKR3P25106 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.34□□□□□ -0.27
ACKR3P25106 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.34□□□□□ -0.27
ACKR3P25106 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.34□□□□□ -0.27
ACKR3P25106 REXO1L2P-201ENST00000425429 2069 ntBASIC13.34□□□□□ -0.27
ACKR3P25106 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.34□□□□□ -0.27
ACKR3P25106 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACKR3P25106 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.34□□□□□ -0.27
ACKR3P25106 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ACKR3P25106 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms