Protein–RNA interactions for Protein: P12980

LYL1, Protein lyl-1, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYL1P12980 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYL1P12980 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LYL1P12980 NUTM2HP-201ENST00000442076 2498 ntBASIC12.57□□□□□ -0.4
LYL1P12980 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYL1P12980 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYL1P12980 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYL1P12980 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LYL1P12980 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.57□□□□□ -0.4
LYL1P12980 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
LYL1P12980 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.57□□□□□ -0.4
LYL1P12980 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYL1P12980 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.57□□□□□ -0.4
LYL1P12980 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.57□□□□□ -0.4
LYL1P12980 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYL1P12980 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LYL1P12980 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.57□□□□□ -0.4
LYL1P12980 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
LYL1P12980 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYL1P12980 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LYL1P12980 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.56□□□□□ -0.4
LYL1P12980 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.56□□□□□ -0.4
LYL1P12980 AP000344.2-201ENST00000512987 629 ntBASIC12.56□□□□□ -0.4
LYL1P12980 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.56□□□□□ -0.4
LYL1P12980 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 MIR4745-201ENST00000577608 62 ntBASIC12.56□□□□□ -0.4
LYL1P12980 AC138761.1-201ENST00000584393 385 ntBASIC12.56□□□□□ -0.4
LYL1P12980 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.56□□□□□ -0.4
LYL1P12980 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.56□□□□□ -0.4
LYL1P12980 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.56□□□□□ -0.4
LYL1P12980 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.56□□□□□ -0.4
LYL1P12980 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 AL136982.4-201ENST00000437689 1740 ntBASIC12.56□□□□□ -0.4
LYL1P12980 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.56□□□□□ -0.4
LYL1P12980 AL607033.1-201ENST00000623900 1599 ntBASIC12.56□□□□□ -0.4
LYL1P12980 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.56□□□□□ -0.4
LYL1P12980 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LYL1P12980 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LYL1P12980 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.55□□□□□ -0.4
LYL1P12980 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
LYL1P12980 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LYL1P12980 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 INE2-201ENST00000630399 1874 ntBASIC12.55□□□□□ -0.4
LYL1P12980 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.55□□□□□ -0.4
LYL1P12980 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LYL1P12980 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LYL1P12980 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LYL1P12980 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LYL1P12980 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms