Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RPL5P21-201ENST00000404620 815 ntBASIC15.14■□□□□ 0.01
CAPN1P07384 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.14■□□□□ 0.01
CAPN1P07384 AL589987.1-201ENST00000453380 819 ntBASIC15.14■□□□□ 0.01
CAPN1P07384 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.14■□□□□ 0.01
CAPN1P07384 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN1P07384 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN1P07384 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CAPN1P07384 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN1P07384 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.14■□□□□ 0.01
CAPN1P07384 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.14■□□□□ 0.01
CAPN1P07384 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.14■□□□□ 0.01
CAPN1P07384 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CAPN1P07384 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CAPN1P07384 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.14■□□□□ 0.01
CAPN1P07384 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CAPN1P07384 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.14■□□□□ 0.01
CAPN1P07384 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CAPN1P07384 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPN1P07384 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
CAPN1P07384 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CAPN1P07384 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPN1P07384 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 AC093004.1-201ENST00000508850 424 ntBASIC15.13■□□□□ 0.01
CAPN1P07384 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 AC025048.3-201ENST00000590609 569 ntBASIC15.13■□□□□ 0.01
CAPN1P07384 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPN1P07384 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.13■□□□□ 0.01
CAPN1P07384 AC005702.4-201ENST00000618393 416 ntBASIC15.13■□□□□ 0.01
CAPN1P07384 LINC01101-201ENST00000622953 1884 ntBASIC15.13■□□□□ 0.01
CAPN1P07384 CU639417.3-201ENST00000624240 1404 ntBASIC15.13■□□□□ 0.01
CAPN1P07384 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPN1P07384 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.13■□□□□ 0.01
CAPN1P07384 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CAPN1P07384 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.13■□□□□ 0.01
CAPN1P07384 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPN1P07384 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.12■□□□□ 0.01
CAPN1P07384 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 SLC7A15P-201ENST00000424028 1363 ntBASIC15.12■□□□□ 0.01
CAPN1P07384 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN1P07384 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CAPN1P07384 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CAPN1P07384 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms