Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-AP01891 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
HLA-AP01891 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-AP01891 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
HLA-AP01891 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-AP01891 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-AP01891 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-AP01891 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.01□□□□□ -0.33
HLA-AP01891 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HLA-AP01891 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HLA-AP01891 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-AP01891 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-AP01891 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
HLA-AP01891 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HLA-AP01891 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-AP01891 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.01□□□□□ -0.33
HLA-AP01891 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HLA-AP01891 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HLA-AP01891 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-AP01891 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-AP01891 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HLA-AP01891 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HLA-AP01891 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
HLA-AP01891 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13□□□□□ -0.33
HLA-AP01891 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13□□□□□ -0.33
HLA-AP01891 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HLA-AP01891 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 AC089987.1-201ENST00000551654 2209 ntBASIC13□□□□□ -0.33
HLA-AP01891 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13□□□□□ -0.33
HLA-AP01891 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13□□□□□ -0.33
HLA-AP01891 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13□□□□□ -0.33
HLA-AP01891 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 AC004987.2-201ENST00000395959 1148 ntBASIC13□□□□□ -0.33
HLA-AP01891 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13□□□□□ -0.33
HLA-AP01891 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 VN2R19P-201ENST00000442399 1052 ntBASIC13□□□□□ -0.33
HLA-AP01891 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13□□□□□ -0.33
HLA-AP01891 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13□□□□□ -0.33
HLA-AP01891 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13□□□□□ -0.33
HLA-AP01891 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13□□□□□ -0.33
HLA-AP01891 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 MST1P2-201ENST00000457982 2291 ntBASIC13□□□□□ -0.33
HLA-AP01891 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HLA-AP01891 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
HLA-AP01891 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13□□□□□ -0.33
HLA-AP01891 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HLA-AP01891 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HLA-AP01891 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.99□□□□□ -0.33
HLA-AP01891 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
HLA-AP01891 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HLA-AP01891 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms