Protein–RNA interactions for Protein: O95487

SEC24B, Protein transport protein Sec24B, humanhuman

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24BO95487 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SEC24BO95487 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.58■□□□□ 0.57
SEC24BO95487 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SEC24BO95487 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC18.58■□□□□ 0.56
SEC24BO95487 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.58■□□□□ 0.56
SEC24BO95487 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.58■□□□□ 0.56
SEC24BO95487 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SEC24BO95487 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.58■□□□□ 0.56
SEC24BO95487 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.58■□□□□ 0.56
SEC24BO95487 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.58■□□□□ 0.56
SEC24BO95487 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 ARHGAP23P1-201ENST00000562773 1937 ntBASIC18.58■□□□□ 0.56
SEC24BO95487 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SEC24BO95487 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEC24BO95487 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.57■□□□□ 0.56
SEC24BO95487 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 AC012617.1-204ENST00000586340 2305 ntBASIC18.57■□□□□ 0.56
SEC24BO95487 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.57■□□□□ 0.56
SEC24BO95487 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
SEC24BO95487 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 AC107918.4-201ENST00000641966 3141 ntBASIC18.57■□□□□ 0.56
SEC24BO95487 BEND3P1-201ENST00000421591 1944 ntBASIC18.57■□□□□ 0.56
SEC24BO95487 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SEC24BO95487 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC18.57■□□□□ 0.56
SEC24BO95487 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.57■□□□□ 0.56
SEC24BO95487 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC18.57■□□□□ 0.56
SEC24BO95487 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.57■□□□□ 0.56
SEC24BO95487 AL132657.2-201ENST00000564417 358 ntBASIC18.57■□□□□ 0.56
SEC24BO95487 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
SEC24BO95487 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.57■□□□□ 0.56
SEC24BO95487 AL451064.1-201ENST00000607718 471 ntBASIC18.57■□□□□ 0.56
SEC24BO95487 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SEC24BO95487 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.57■□□□□ 0.56
SEC24BO95487 AC023090.2-201ENST00000625182 2110 ntBASIC18.57■□□□□ 0.56
SEC24BO95487 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.57■□□□□ 0.56
SEC24BO95487 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SEC24BO95487 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.57■□□□□ 0.56
SEC24BO95487 AC011474.4-201ENST00000623523 2076 ntBASIC18.57■□□□□ 0.56
SEC24BO95487 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SEC24BO95487 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 CICP16-201ENST00000502609 2813 ntBASIC18.57■□□□□ 0.56
SEC24BO95487 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.57■□□□□ 0.56
SEC24BO95487 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.57■□□□□ 0.56
SEC24BO95487 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC18.57■□□□□ 0.56
SEC24BO95487 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SEC24BO95487 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEC24BO95487 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
SEC24BO95487 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.56■□□□□ 0.56
SEC24BO95487 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SEC24BO95487 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SEC24BO95487 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SEC24BO95487 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SEC24BO95487 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.56■□□□□ 0.56
SEC24BO95487 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.56■□□□□ 0.56
SEC24BO95487 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC18.56■□□□□ 0.56
SEC24BO95487 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.56■□□□□ 0.56
SEC24BO95487 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEC24BO95487 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SEC24BO95487 AC010336.2-201ENST00000564226 506 ntBASIC18.56■□□□□ 0.56
SEC24BO95487 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms