Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH16O75309 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.52■□□□□ 0.07
CDH16O75309 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH16O75309 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH16O75309 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CDH16O75309 AC055811.4-201ENST00000624039 1754 ntBASIC15.52■□□□□ 0.07
CDH16O75309 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CDH16O75309 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH16O75309 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 MBLAC2-202ENST00000514906 1936 ntBASIC15.51■□□□□ 0.07
CDH16O75309 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH16O75309 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 AC004832.2-201ENST00000426397 482 ntBASIC15.51■□□□□ 0.07
CDH16O75309 AL353705.2-201ENST00000428243 662 ntBASIC15.51■□□□□ 0.07
CDH16O75309 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH16O75309 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH16O75309 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH16O75309 AC079140.1-201ENST00000508039 487 ntBASIC15.51■□□□□ 0.07
CDH16O75309 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CDH16O75309 PGAM5P1-201ENST00000518923 814 ntBASIC15.51■□□□□ 0.07
CDH16O75309 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH16O75309 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH16O75309 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH16O75309 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.51■□□□□ 0.07
CDH16O75309 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH16O75309 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CDH16O75309 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH16O75309 AC026120.1-201ENST00000611536 926 ntBASIC15.51■□□□□ 0.07
CDH16O75309 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH16O75309 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CDH16O75309 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
CDH16O75309 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH16O75309 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH16O75309 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH16O75309 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH16O75309 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDH16O75309 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDH16O75309 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH16O75309 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 AL133267.1-201ENST00000398220 340 ntBASIC15.5■□□□□ 0.07
CDH16O75309 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
CDH16O75309 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH16O75309 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
CDH16O75309 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH16O75309 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 MTDHP5-201ENST00000598980 586 ntBASIC15.5■□□□□ 0.07
CDH16O75309 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH16O75309 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
CDH16O75309 AC092902.6-201ENST00000641783 218 ntBASIC15.5■□□□□ 0.07
CDH16O75309 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH16O75309 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH16O75309 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH16O75309 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH16O75309 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms