Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.31□□□□□ -0.44
UPK2O00526 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.31□□□□□ -0.44
UPK2O00526 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
UPK2O00526 AC004461.2-201ENST00000629517 803 ntBASIC12.31□□□□□ -0.44
UPK2O00526 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
UPK2O00526 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
UPK2O00526 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
UPK2O00526 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK2O00526 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.31□□□□□ -0.44
UPK2O00526 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK2O00526 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK2O00526 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK2O00526 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK2O00526 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK2O00526 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.31□□□□□ -0.44
UPK2O00526 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 INTS4P1-203ENST00000641008 3683 ntBASIC12.31□□□□□ -0.44
UPK2O00526 AL359258.3-201ENST00000622910 2331 ntBASIC12.31□□□□□ -0.44
UPK2O00526 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.31□□□□□ -0.44
UPK2O00526 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UPK2O00526 LILRP1-201ENST00000444199 1370 ntBASIC12.3□□□□□ -0.44
UPK2O00526 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
UPK2O00526 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 SNX18-202ENST00000343017 3140 ntBASIC12.3□□□□□ -0.44
UPK2O00526 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.3□□□□□ -0.44
UPK2O00526 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.3□□□□□ -0.44
UPK2O00526 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.3□□□□□ -0.44
UPK2O00526 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.3□□□□□ -0.44
UPK2O00526 AC004066.1-201ENST00000502488 802 ntBASIC12.3□□□□□ -0.44
UPK2O00526 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 AC015911.4-201ENST00000588022 1070 ntBASIC12.3□□□□□ -0.44
UPK2O00526 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.3□□□□□ -0.44
UPK2O00526 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.3□□□□□ -0.44
UPK2O00526 AL844908.2-201ENST00000609461 460 ntBASIC12.3□□□□□ -0.44
UPK2O00526 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.3□□□□□ -0.44
UPK2O00526 AC079781.4-201ENST00000641908 219 ntBASIC12.3□□□□□ -0.44
UPK2O00526 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
UPK2O00526 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
UPK2O00526 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.3□□□□□ -0.44
UPK2O00526 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.3□□□□□ -0.44
UPK2O00526 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
UPK2O00526 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
UPK2O00526 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
UPK2O00526 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UPK2O00526 AC018442.1-201ENST00000421439 2061 ntBASIC12.3□□□□□ -0.44
UPK2O00526 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
UPK2O00526 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.29□□□□□ -0.44
UPK2O00526 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
UPK2O00526 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
UPK2O00526 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms