Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 HSPA7-201ENST00000445535 1927 ntBASIC11.96□□□□□ -0.5
TRAV5A0A0B4J249 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 ZNF259P1-201ENST00000407656 1365 ntBASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 AC018442.1-201ENST00000421439 2061 ntBASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 MED15P5-201ENST00000423150 992 ntBASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 AC069335.1-201ENST00000489972 472 ntBASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 AC105021.1-202ENST00000570572 669 ntBASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TRAV5A0A0B4J249 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 AC136759.1-202ENST00000530858 2194 ntBASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.94□□□□□ -0.5
TRAV5A0A0B4J249 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms