Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 AP006547.1-201ENST00000563435 692 ntBASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 DUX4L47-201ENST00000566374 394 ntBASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 OR10B1P-201ENST00000601666 907 ntBASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRGV5A0A0B4J1U4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 AL157414.3-201ENST00000624276 1954 ntBASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 REXO1L4P-201ENST00000605109 1937 ntBASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 MTX1P1-201ENST00000440904 838 ntBASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 GOLGA2P4-201ENST00000441462 777 ntBASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 GPR182-203ENST00000622922 591 ntBASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRGV5A0A0B4J1U4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRGV5A0A0B4J1U4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRGV5A0A0B4J1U4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRGV5A0A0B4J1U4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
TRGV5A0A0B4J1U4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 AC015818.8-201ENST00000587907 1519 ntBASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV5A0A0B4J1U4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms