Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 WWOX-216ENST00000569818 525 ntBASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 MIR4674-201ENST00000582457 87 ntBASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 MAG-206ENST00000597035 542 ntTSL 4 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 Six3os1_6.1-201ENST00000620790 196 ntBASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 CSPG4P13-202ENST00000567704 4801 ntBASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 TOP3BP1-201ENST00000420768 1380 ntBASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 OR2I1P-208ENST00000641137 4948 ntBASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LINC01558Q9Y6Z2 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 AL021155.1-201ENST00000438808 2637 ntBASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 TSPY12P-201ENST00000421279 868 ntBASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 CNN2P6-201ENST00000439038 900 ntBASIC7.82□□□□□ -1.16
LINC01558Q9Y6Z2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms