Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 AL118506.1-201ENST00000601296 3082 ntBASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LRCH1Q9Y2L9 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 MRPL3P1-201ENST00000400109 1033 ntBASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRCH1Q9Y2L9 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 AC018712.1-201ENST00000455767 687 ntBASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TPT1P11-201ENST00000458482 498 ntBASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
LRCH1Q9Y2L9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms