Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LST1-206ENST00000376090 689 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LST1-209ENST00000376096 565 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LST1-210ENST00000376099 610 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LST1-214ENST00000418507 726 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 AC022616.1-201ENST00000518688 554 ntBASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 RPSAP52-203ENST00000622976 1023 ntBASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 AC025048.6-201ENST00000634326 1161 ntBASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGC3Q9UN70 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 AC098614.1-201ENST00000368528 745 ntBASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 AC012497.1-201ENST00000429392 575 ntBASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 AC093433.1-201ENST00000458048 571 ntBASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 AC009486.1-201ENST00000569860 813 ntBASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGC3Q9UN70 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 AC099063.4-201ENST00000641099 1602 ntBASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 AP006294.1-201ENST00000415407 339 ntBASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 ACTG1P3-201ENST00000431775 1114 ntBASIC16.09■□□□□ 0.17
PCDHGC3Q9UN70 EIF3FP3-201ENST00000434851 1086 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms