Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 MIR3180-3-201ENST00000584616 94 ntBASIC14.49□□□□□ -0.09
NR1H4Q96RI1 AC092329.2-201ENST00000598402 547 ntBASIC14.49□□□□□ -0.09
NR1H4Q96RI1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.49□□□□□ -0.09
NR1H4Q96RI1 AC093458.2-201ENST00000623150 629 ntBASIC14.49□□□□□ -0.09
NR1H4Q96RI1 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NR1H4Q96RI1 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 MIR5100-201ENST00000579544 119 ntBASIC14.48□□□□□ -0.09
NR1H4Q96RI1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 AC138894.3-201ENST00000603787 634 ntBASIC14.48□□□□□ -0.09
NR1H4Q96RI1 AL591684.3-201ENST00000605187 298 ntBASIC14.48□□□□□ -0.09
NR1H4Q96RI1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NR1H4Q96RI1 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 AL031595.1-201ENST00000623969 4709 ntBASIC14.47□□□□□ -0.09
NR1H4Q96RI1 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 ABCD1P5-201ENST00000445663 754 ntBASIC14.47□□□□□ -0.09
NR1H4Q96RI1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 AC091076.1-201ENST00000610741 619 ntBASIC14.47□□□□□ -0.09
NR1H4Q96RI1 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NR1H4Q96RI1 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms