Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 ACTL9-202ENST00000612068 1252 ntBASIC11.68□□□□□ -0.54
AP1S3Q96PC3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 AC005912.2-201ENST00000619492 2400 ntBASIC11.68□□□□□ -0.54
AP1S3Q96PC3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
AP1S3Q96PC3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 CICP17-201ENST00000418553 2377 ntBASIC11.67□□□□□ -0.54
AP1S3Q96PC3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 AC090616.6-203ENST00000579186 1945 ntBASIC11.67□□□□□ -0.54
AP1S3Q96PC3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 HMGA1P7-201ENST00000406908 502 ntBASIC11.67□□□□□ -0.54
AP1S3Q96PC3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 FAM185BP-201ENST00000443595 716 ntBASIC11.67□□□□□ -0.54
AP1S3Q96PC3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 CXCL1P1-201ENST00000502804 216 ntBASIC11.67□□□□□ -0.54
AP1S3Q96PC3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 PRELID1P1-202ENST00000567272 903 ntBASIC11.67□□□□□ -0.54
AP1S3Q96PC3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 AL356488.2-201ENST00000602755 427 ntBASIC11.67□□□□□ -0.54
AP1S3Q96PC3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 AC105250.1-201ENST00000509378 2057 ntBASIC11.67□□□□□ -0.54
AP1S3Q96PC3 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
AP1S3Q96PC3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms