Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 MIR4522-201ENST00000584932 87 ntBASIC17.6■□□□□ 0.41
CDCA5Q96FF9 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 AC015909.3-201ENST00000572855 1794 ntBASIC17.6■□□□□ 0.41
CDCA5Q96FF9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.6■□□□□ 0.41
CDCA5Q96FF9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 AL662844.4-201ENST00000606367 2838 ntBASIC17.6■□□□□ 0.41
CDCA5Q96FF9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 AC092127.1-201ENST00000567093 3455 ntBASIC17.6■□□□□ 0.41
CDCA5Q96FF9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDCA5Q96FF9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 Z69890.1-201ENST00000382990 339 ntBASIC17.59■□□□□ 0.41
CDCA5Q96FF9 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 CHCHD2P9-201ENST00000461726 456 ntBASIC17.59■□□□□ 0.41
CDCA5Q96FF9 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 AC006122.1-201ENST00000493323 440 ntBASIC17.59■□□□□ 0.41
CDCA5Q96FF9 AC010234.1-201ENST00000494599 870 ntBASIC17.59■□□□□ 0.41
CDCA5Q96FF9 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA5Q96FF9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA5Q96FF9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA5Q96FF9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
CDCA5Q96FF9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.58■□□□□ 0.41
CDCA5Q96FF9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA5Q96FF9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA5Q96FF9 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA5Q96FF9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDCA5Q96FF9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
CDCA5Q96FF9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CDCA5Q96FF9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDCA5Q96FF9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.58■□□□□ 0.4
CDCA5Q96FF9 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.58■□□□□ 0.4
CDCA5Q96FF9 AL627422.1-201ENST00000434104 580 ntBASIC17.58■□□□□ 0.4
CDCA5Q96FF9 AL157407.1-201ENST00000435784 904 ntBASIC17.58■□□□□ 0.4
CDCA5Q96FF9 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CDCA5Q96FF9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms