Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATP2A3Q93084 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.2■□□□□ 0.18
ATP2A3Q93084 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 AL607033.1-201ENST00000623900 1599 ntBASIC16.19■□□□□ 0.18
ATP2A3Q93084 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 AL355864.2-201ENST00000447420 863 ntBASIC16.19■□□□□ 0.18
ATP2A3Q93084 AC068587.3-201ENST00000526613 355 ntBASIC16.19■□□□□ 0.18
ATP2A3Q93084 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 AC000095.1-201ENST00000603208 874 ntBASIC16.19■□□□□ 0.18
ATP2A3Q93084 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.19■□□□□ 0.18
ATP2A3Q93084 PDIA3P1-201ENST00000471856 1510 ntBASIC16.19■□□□□ 0.18
ATP2A3Q93084 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATP2A3Q93084 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.18■□□□□ 0.18
ATP2A3Q93084 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 AC011477.6-201ENST00000604980 1927 ntBASIC16.18■□□□□ 0.18
ATP2A3Q93084 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 ANKRD19P-201ENST00000338192 862 ntBASIC16.18■□□□□ 0.18
ATP2A3Q93084 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 CTBP2P5-201ENST00000454986 1264 ntBASIC16.18■□□□□ 0.18
ATP2A3Q93084 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 AL033527.4-201ENST00000641026 673 ntBASIC16.18■□□□□ 0.18
ATP2A3Q93084 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 AL121723.1-201ENST00000445194 1519 ntBASIC16.18■□□□□ 0.18
ATP2A3Q93084 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ATP2A3Q93084 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.18■□□□□ 0.18
ATP2A3Q93084 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms