Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 AC104457.1-201ENST00000401024 814 ntBASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 AL645728.2-202ENST00000641679 227 ntBASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
MBD3L1Q8WWY6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 TCAM1P-207ENST00000485295 1537 ntBASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 PRSS29P-201ENST00000440800 595 ntBASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 AL139010.1-201ENST00000454878 894 ntBASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 AL356488.2-201ENST00000602755 427 ntBASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
MBD3L1Q8WWY6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms