Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 AC099063.4-201ENST00000641099 1602 ntBASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 BTBD7P1-201ENST00000447253 1453 ntBASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAF3IP1Q8TDR0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 LINC01101-201ENST00000622953 1884 ntBASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 AC114501.2-201ENST00000439631 535 ntBASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 AL512638.1-201ENST00000457493 794 ntBASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 AC106028.4-201ENST00000614509 607 ntBASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 AC093512.1-201ENST00000617969 520 ntBASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAF3IP1Q8TDR0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAF3IP1Q8TDR0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 AC007686.3-201ENST00000619017 3487 ntBASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 AC055876.3-201ENST00000431496 288 ntBASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 AC011467.4-201ENST00000594891 528 ntBASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 AC138649.4-201ENST00000612222 287 ntBASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAF3IP1Q8TDR0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms