Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 MIR4683-201ENST00000579659 81 ntBASIC15.29■□□□□ 0.04
CHD5Q8TDI0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 CICP24-201ENST00000605464 2705 ntBASIC15.29■□□□□ 0.04
CHD5Q8TDI0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 KHSRPP1-201ENST00000427983 1768 ntBASIC15.29■□□□□ 0.04
CHD5Q8TDI0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 FKBP4P6-201ENST00000457486 1332 ntBASIC15.29■□□□□ 0.04
CHD5Q8TDI0 RN7SKP230-201ENST00000365642 335 ntBASIC15.29■□□□□ 0.04
CHD5Q8TDI0 GCOM2-201ENST00000509133 1104 ntBASIC15.29■□□□□ 0.04
CHD5Q8TDI0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 AC103988.2-201ENST00000561804 725 ntBASIC15.29■□□□□ 0.04
CHD5Q8TDI0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHD5Q8TDI0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 AC006058.4-201ENST00000624016 1670 ntBASIC15.28■□□□□ 0.04
CHD5Q8TDI0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 MIR663B-201ENST00000408361 115 ntBASIC15.28■□□□□ 0.04
CHD5Q8TDI0 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 RNA5SP486-201ENST00000515961 83 ntBASIC15.28■□□□□ 0.04
CHD5Q8TDI0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.28■□□□□ 0.04
CHD5Q8TDI0 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 AC008687.7-202ENST00000637404 953 ntBASIC15.28■□□□□ 0.04
CHD5Q8TDI0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 TUBB1P2-201ENST00000422712 1306 ntBASIC15.28■□□□□ 0.04
CHD5Q8TDI0 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CHD5Q8TDI0 TUBB1P1-201ENST00000503144 1300 ntBASIC15.28■□□□□ 0.04
CHD5Q8TDI0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms