Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 HR-201ENST00000312841 5351 ntTSL 5 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 API5-203ENST00000455725 2257 ntTSL 2 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 BRWD1P1-201ENST00000401091 371 ntBASIC23.53■■□□□ 1.36
VPS8Q8N3P4 BTBD6P1-201ENST00000412176 1267 ntBASIC23.53■■□□□ 1.36
VPS8Q8N3P4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 AC006033.1-201ENST00000440505 426 ntBASIC23.53■■□□□ 1.36
VPS8Q8N3P4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC23.53■■□□□ 1.36
VPS8Q8N3P4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 SHC1P1-201ENST00000425230 1745 ntBASIC23.52■■□□□ 1.36
VPS8Q8N3P4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 AC099548.2-209ENST00000480264 625 ntBASIC23.52■■□□□ 1.36
VPS8Q8N3P4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 CICP23-201ENST00000605013 2741 ntBASIC23.52■■□□□ 1.36
VPS8Q8N3P4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC23.52■■□□□ 1.36
VPS8Q8N3P4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
VPS8Q8N3P4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 AGER-214ENST00000538695 487 ntTSL 2 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC23.51■■□□□ 1.35
VPS8Q8N3P4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms