Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLF2Q8IX21 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.16■□□□□ 0.5
SLF2Q8IX21 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLF2Q8IX21 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.16■□□□□ 0.5
SLF2Q8IX21 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.16■□□□□ 0.5
SLF2Q8IX21 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLF2Q8IX21 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLF2Q8IX21 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 AP000593.2-201ENST00000542775 1433 ntBASIC18.15■□□□□ 0.5
SLF2Q8IX21 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 CHMP1AP1-201ENST00000445563 662 ntBASIC18.15■□□□□ 0.5
SLF2Q8IX21 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 AL139099.5-201ENST00000635274 300 ntBASIC18.15■□□□□ 0.5
SLF2Q8IX21 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLF2Q8IX21 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.15■□□□□ 0.5
SLF2Q8IX21 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLF2Q8IX21 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
SLF2Q8IX21 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLF2Q8IX21 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLF2Q8IX21 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.14■□□□□ 0.5
SLF2Q8IX21 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 AC126915.1-201ENST00000522847 1038 ntBASIC18.14■□□□□ 0.49
SLF2Q8IX21 AP003171.2-201ENST00000528208 925 ntBASIC18.14■□□□□ 0.49
SLF2Q8IX21 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 AC004466.1-201ENST00000599515 1080 ntBASIC18.14■□□□□ 0.49
SLF2Q8IX21 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 MST1L-201ENST00000442552 2185 ntBASIC18.14■□□□□ 0.49
SLF2Q8IX21 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLF2Q8IX21 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SLF2Q8IX21 AL137783.1-201ENST00000623494 1896 ntBASIC18.14■□□□□ 0.49
SLF2Q8IX21 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLF2Q8IX21 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLF2Q8IX21 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLF2Q8IX21 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLF2Q8IX21 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLF2Q8IX21 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLF2Q8IX21 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLF2Q8IX21 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLF2Q8IX21 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLF2Q8IX21 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLF2Q8IX21 AC004945.1-201ENST00000416738 983 ntBASIC18.13■□□□□ 0.49
SLF2Q8IX21 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 HIST2H2BB-201ENST00000449108 381 ntBASIC18.13■□□□□ 0.49
SLF2Q8IX21 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.13■□□□□ 0.49
SLF2Q8IX21 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms