Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 EIF3FP3-201ENST00000434851 1086 ntBASIC16.51■□□□□ 0.23
HERC6Q8IVU3 AC069218.1-201ENST00000435269 762 ntBASIC16.51■□□□□ 0.23
HERC6Q8IVU3 AL596276.2-201ENST00000447525 331 ntBASIC16.51■□□□□ 0.23
HERC6Q8IVU3 AC012618.1-201ENST00000461223 412 ntBASIC16.51■□□□□ 0.23
HERC6Q8IVU3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 AL161670.2-201ENST00000557650 1227 ntBASIC16.51■□□□□ 0.23
HERC6Q8IVU3 AC013355.1-201ENST00000562625 723 ntBASIC16.51■□□□□ 0.23
HERC6Q8IVU3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 AC018635.2-201ENST00000608625 364 ntBASIC16.51■□□□□ 0.23
HERC6Q8IVU3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 AC007787.1-201ENST00000588095 1583 ntBASIC16.51■□□□□ 0.23
HERC6Q8IVU3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AL596087.1-201ENST00000400979 1969 ntBASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AL158070.2-201ENST00000623713 1621 ntBASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AC004066.1-201ENST00000502488 802 ntBASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AC106794.1-201ENST00000506935 792 ntBASIC16.5■□□□□ 0.23
HERC6Q8IVU3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AC103702.1-201ENST00000548801 2630 ntBASIC16.5■□□□□ 0.23
HERC6Q8IVU3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AC092364.2-201ENST00000596710 2692 ntBASIC16.5■□□□□ 0.23
HERC6Q8IVU3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 AL513523.2-202ENST00000427283 2040 ntBASIC16.5■□□□□ 0.23
HERC6Q8IVU3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HERC6Q8IVU3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.49■□□□□ 0.23
HERC6Q8IVU3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms