Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 VDAC1P7-201ENST00000462417 847 ntBASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CPNE8Q86YQ8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 BTBD7P1-201ENST00000447253 1453 ntBASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 BX640514.1-201ENST00000583223 1918 ntBASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE8Q86YQ8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 FAM86LP-201ENST00000478302 853 ntBASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 AC093214.1-201ENST00000511688 1107 ntBASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE8Q86YQ8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE8Q86YQ8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE8Q86YQ8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms