Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.2□□□□□ -0.14
VRK2Q86Y07 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VRK2Q86Y07 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
VRK2Q86Y07 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 AC055876.3-201ENST00000431496 288 ntBASIC14.19□□□□□ -0.14
VRK2Q86Y07 MEIS3P1-201ENST00000495167 958 ntBASIC14.19□□□□□ -0.14
VRK2Q86Y07 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 AC135586.1-201ENST00000539323 574 ntBASIC14.19□□□□□ -0.14
VRK2Q86Y07 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 AC138649.4-201ENST00000612222 287 ntBASIC14.19□□□□□ -0.14
VRK2Q86Y07 AC093512.1-201ENST00000617969 520 ntBASIC14.19□□□□□ -0.14
VRK2Q86Y07 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VRK2Q86Y07 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 INTS4P1-203ENST00000641008 3683 ntBASIC14.19□□□□□ -0.14
VRK2Q86Y07 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
VRK2Q86Y07 CLK3P2-201ENST00000427566 1453 ntBASIC14.18□□□□□ -0.14
VRK2Q86Y07 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 SAMD11P1-201ENST00000571429 661 ntBASIC14.18□□□□□ -0.14
VRK2Q86Y07 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 AC106028.4-201ENST00000614509 607 ntBASIC14.18□□□□□ -0.14
VRK2Q86Y07 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 BTBD7P1-201ENST00000447253 1453 ntBASIC14.18□□□□□ -0.14
VRK2Q86Y07 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
VRK2Q86Y07 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VRK2Q86Y07 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms