Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 CD8B2-202ENST00000417670 633 ntBASIC17.02■□□□□ 0.32
TRIM50Q86XT4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 CNN2P10-201ENST00000443067 918 ntBASIC17.02■□□□□ 0.32
TRIM50Q86XT4 HOMER2P2-201ENST00000451621 847 ntBASIC17.02■□□□□ 0.32
TRIM50Q86XT4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 AL645728.2-202ENST00000641679 227 ntBASIC17.02■□□□□ 0.32
TRIM50Q86XT4 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 PAUPAR-201ENST00000630360 2965 ntBASIC17.02■□□□□ 0.31
TRIM50Q86XT4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM50Q86XT4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TRIM50Q86XT4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM50Q86XT4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM50Q86XT4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM50Q86XT4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM50Q86XT4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM50Q86XT4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM50Q86XT4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM50Q86XT4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRIM50Q86XT4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 MIR1247-201ENST00000408206 136 ntBASIC17.01■□□□□ 0.31
TRIM50Q86XT4 MTX1P1-201ENST00000440904 838 ntBASIC17.01■□□□□ 0.31
TRIM50Q86XT4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 RPSAP36-202ENST00000494591 1261 ntBASIC17.01■□□□□ 0.31
TRIM50Q86XT4 AP003171.2-201ENST00000528208 925 ntBASIC17.01■□□□□ 0.31
TRIM50Q86XT4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 MIR3615-201ENST00000581999 87 ntBASIC17.01■□□□□ 0.31
TRIM50Q86XT4 EEF1DP1-201ENST00000585891 896 ntBASIC17.01■□□□□ 0.31
TRIM50Q86XT4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 AC004466.1-201ENST00000599515 1080 ntBASIC17.01■□□□□ 0.31
TRIM50Q86XT4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRIM50Q86XT4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms