Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
OTOP1Q7RTM1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
OTOP1Q7RTM1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
OTOP1Q7RTM1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OTOP1Q7RTM1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OTOP1Q7RTM1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
OTOP1Q7RTM1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
OTOP1Q7RTM1 KRT8P4-201ENST00000509735 1454 ntBASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 AC103988.2-201ENST00000561804 725 ntBASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 AC012044.1-201ENST00000603431 297 ntBASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 AP001065.2-201ENST00000617205 644 ntBASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 AC006453.1-201ENST00000636037 1257 ntBASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.56■□□□□ 0.4
OTOP1Q7RTM1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 AC090616.6-203ENST00000579186 1945 ntBASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 BNIP3P13-201ENST00000599968 566 ntBASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 OR10B1P-201ENST00000601666 907 ntBASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 AC087045.2-201ENST00000606279 1003 ntBASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 AL805961.1-201ENST00000642026 753 ntBASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OTOP1Q7RTM1 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 AL353637.1-201ENST00000451571 732 ntBASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 RNMTL1P1-201ENST00000454103 560 ntBASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 AC116345.2-201ENST00000512837 523 ntBASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
OTOP1Q7RTM1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms