Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AP000769.1-203ENST00000637245 208 ntBASIC19.88■□□□□ 0.77
COL16A1Q07092 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL16A1Q07092 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.88■□□□□ 0.77
COL16A1Q07092 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL16A1Q07092 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
COL16A1Q07092 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
COL16A1Q07092 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.88■□□□□ 0.77
COL16A1Q07092 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL16A1Q07092 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.87■□□□□ 0.77
COL16A1Q07092 RNVU1-8-201ENST00000364272 125 ntBASIC19.87■□□□□ 0.77
COL16A1Q07092 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC19.87■□□□□ 0.77
COL16A1Q07092 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC19.87■□□□□ 0.77
COL16A1Q07092 RN7SL564P-201ENST00000496309 250 ntBASIC19.87■□□□□ 0.77
COL16A1Q07092 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC19.87■□□□□ 0.77
COL16A1Q07092 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC19.87■□□□□ 0.77
COL16A1Q07092 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC19.87■□□□□ 0.77
COL16A1Q07092 FBXO36P1-201ENST00000579006 471 ntBASIC19.87■□□□□ 0.77
COL16A1Q07092 AC080013.5-201ENST00000607044 679 ntBASIC19.87■□□□□ 0.77
COL16A1Q07092 AC004466.2-201ENST00000614749 516 ntBASIC19.87■□□□□ 0.77
COL16A1Q07092 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC19.87■□□□□ 0.77
COL16A1Q07092 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.87■□□□□ 0.77
COL16A1Q07092 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COL16A1Q07092 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC19.87■□□□□ 0.77
COL16A1Q07092 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC19.87■□□□□ 0.77
COL16A1Q07092 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
COL16A1Q07092 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COL16A1Q07092 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL16A1Q07092 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC19.87■□□□□ 0.77
COL16A1Q07092 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC19.87■□□□□ 0.77
COL16A1Q07092 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC19.87■□□□□ 0.77
COL16A1Q07092 KNOP1P1-201ENST00000542108 989 ntBASIC19.87■□□□□ 0.77
COL16A1Q07092 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL16A1Q07092 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL16A1Q07092 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL16A1Q07092 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.86■□□□□ 0.77
COL16A1Q07092 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL16A1Q07092 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL16A1Q07092 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL16A1Q07092 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL16A1Q07092 FUCA1P1-201ENST00000374476 1351 ntBASIC19.86■□□□□ 0.77
COL16A1Q07092 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.86■□□□□ 0.77
COL16A1Q07092 LINC02447-202ENST00000501888 2146 ntBASIC19.86■□□□□ 0.77
COL16A1Q07092 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COL16A1Q07092 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC19.86■□□□□ 0.77
COL16A1Q07092 PIFO-201ENST00000369737 746 ntTSL 2 BASIC19.86■□□□□ 0.77
COL16A1Q07092 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.86■□□□□ 0.77
COL16A1Q07092 AC092570.1-201ENST00000414446 469 ntBASIC19.86■□□□□ 0.77
COL16A1Q07092 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC19.86■□□□□ 0.77
COL16A1Q07092 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL16A1Q07092 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
COL16A1Q07092 COX5A-205ENST00000568517 582 ntTSL 3 BASIC19.86■□□□□ 0.77
COL16A1Q07092 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.86■□□□□ 0.77
COL16A1Q07092 AGGF1P2-201ENST00000426656 2106 ntBASIC19.86■□□□□ 0.77
COL16A1Q07092 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL16A1Q07092 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL16A1Q07092 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
COL16A1Q07092 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC19.86■□□□□ 0.77
COL16A1Q07092 TEKT4P2-202ENST00000559466 1312 ntBASIC19.86■□□□□ 0.77
COL16A1Q07092 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL16A1Q07092 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
COL16A1Q07092 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC19.86■□□□□ 0.77
COL16A1Q07092 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.85■□□□□ 0.77
COL16A1Q07092 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 AC112504.1-201ENST00000623415 1841 ntBASIC19.85■□□□□ 0.77
COL16A1Q07092 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC19.85■□□□□ 0.77
COL16A1Q07092 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.85■□□□□ 0.77
COL16A1Q07092 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
COL16A1Q07092 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC19.85■□□□□ 0.77
COL16A1Q07092 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC19.85■□□□□ 0.77
COL16A1Q07092 OR8T1P-201ENST00000421347 918 ntBASIC19.85■□□□□ 0.77
COL16A1Q07092 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL16A1Q07092 AL512599.1-201ENST00000430724 685 ntBASIC19.85■□□□□ 0.77
COL16A1Q07092 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC19.85■□□□□ 0.77
COL16A1Q07092 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC19.85■□□□□ 0.77
COL16A1Q07092 BCRP4-201ENST00000506079 804 ntBASIC19.85■□□□□ 0.77
COL16A1Q07092 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC19.85■□□□□ 0.77
COL16A1Q07092 FOXN3-AS2-201ENST00000554071 1262 ntBASIC19.85■□□□□ 0.77
COL16A1Q07092 MED11-202ENST00000573708 802 ntTSL 2 BASIC19.85■□□□□ 0.77
COL16A1Q07092 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL16A1Q07092 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC19.85■□□□□ 0.77
COL16A1Q07092 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 285.9 ms