Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDK5Q00535 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CDK5Q00535 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CDK5Q00535 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.83□□□□□ -0.19
CDK5Q00535 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDK5Q00535 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.83□□□□□ -0.19
CDK5Q00535 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
CDK5Q00535 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CDK5Q00535 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
CDK5Q00535 AL080243.2-201ENST00000418783 582 ntBASIC13.83□□□□□ -0.2
CDK5Q00535 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
CDK5Q00535 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 SERBP1P3-201ENST00000459980 809 ntBASIC13.83□□□□□ -0.2
CDK5Q00535 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.83□□□□□ -0.2
CDK5Q00535 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.83□□□□□ -0.2
CDK5Q00535 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.83□□□□□ -0.2
CDK5Q00535 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 SAMD11P1-201ENST00000571429 661 ntBASIC13.83□□□□□ -0.2
CDK5Q00535 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.83□□□□□ -0.2
CDK5Q00535 MIR4453-201ENST00000584019 89 ntBASIC13.83□□□□□ -0.2
CDK5Q00535 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CDK5Q00535 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CDK5Q00535 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CDK5Q00535 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.83□□□□□ -0.2
CDK5Q00535 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDK5Q00535 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CDK5Q00535 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDK5Q00535 MIR600HG-201ENST00000449175 5984 ntBASIC13.82□□□□□ -0.2
CDK5Q00535 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.82□□□□□ -0.2
CDK5Q00535 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.82□□□□□ -0.2
CDK5Q00535 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.82□□□□□ -0.2
CDK5Q00535 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 MIR940-201ENST00000401276 94 ntBASIC13.82□□□□□ -0.2
CDK5Q00535 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.82□□□□□ -0.2
CDK5Q00535 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.82□□□□□ -0.2
CDK5Q00535 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.82□□□□□ -0.2
CDK5Q00535 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.82□□□□□ -0.2
CDK5Q00535 LINC01115-203ENST00000606068 577 ntBASIC13.82□□□□□ -0.2
CDK5Q00535 AL589739.1-201ENST00000607720 493 ntBASIC13.82□□□□□ -0.2
CDK5Q00535 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.82□□□□□ -0.2
CDK5Q00535 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.82□□□□□ -0.2
CDK5Q00535 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
CDK5Q00535 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.82□□□□□ -0.2
CDK5Q00535 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDK5Q00535 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms