Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEP78395 AC092183.1-201ENST00000469884 875 ntBASIC15.52■□□□□ 0.08
PRAMEP78395 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.52■□□□□ 0.08
PRAMEP78395 AC004890.2-204ENST00000481968 304 ntBASIC15.52■□□□□ 0.08
PRAMEP78395 AC093214.1-201ENST00000511688 1107 ntBASIC15.52■□□□□ 0.08
PRAMEP78395 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.52■□□□□ 0.08
PRAMEP78395 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEP78395 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEP78395 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.52■□□□□ 0.08
PRAMEP78395 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.52■□□□□ 0.08
PRAMEP78395 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PRAMEP78395 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEP78395 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 MROH4P-201ENST00000431302 1578 ntBASIC15.52■□□□□ 0.07
PRAMEP78395 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PRAMEP78395 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PRAMEP78395 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
PRAMEP78395 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEP78395 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PRAMEP78395 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 ST20-AS1-201ENST00000560255 4223 ntBASIC15.51■□□□□ 0.07
PRAMEP78395 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PRAMEP78395 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PRAMEP78395 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PRAMEP78395 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEP78395 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
PRAMEP78395 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PRAMEP78395 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 PMS2P2-201ENST00000425039 1128 ntBASIC15.51■□□□□ 0.07
PRAMEP78395 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.51■□□□□ 0.07
PRAMEP78395 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.51■□□□□ 0.07
PRAMEP78395 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 MEIS3P1-201ENST00000495167 958 ntBASIC15.51■□□□□ 0.07
PRAMEP78395 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 RFPL4AP1-201ENST00000530883 850 ntBASIC15.51■□□□□ 0.07
PRAMEP78395 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.51■□□□□ 0.07
PRAMEP78395 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
PRAMEP78395 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEP78395 AC008738.7-201ENST00000609744 511 ntBASIC15.51■□□□□ 0.07
PRAMEP78395 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PRAMEP78395 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PRAMEP78395 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEP78395 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEP78395 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PRAMEP78395 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEP78395 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PRAMEP78395 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PRAMEP78395 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEP78395 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.5■□□□□ 0.07
PRAMEP78395 GHSR-202ENST00000427970 912 ntBASIC15.5■□□□□ 0.07
PRAMEP78395 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.5■□□□□ 0.07
PRAMEP78395 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEP78395 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.5■□□□□ 0.07
PRAMEP78395 AL390955.2-201ENST00000603032 514 ntBASIC15.5■□□□□ 0.07
PRAMEP78395 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms