Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC022210.1-201ENST00000449856 793 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC009486.1-201ENST00000569860 813 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 GNRHR2-203ENST00000581100 1187 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AL008721.1-201ENST00000609964 604 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 MIR6775-201ENST00000617557 69 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC007787.1-201ENST00000588095 1583 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.25■□□□□ 0.19
CACNA2D1P54289 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 AC087481.3-201ENST00000602886 1894 ntBASIC16.25■□□□□ 0.19
CACNA2D1P54289 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CACNA2D1P54289 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 AL359258.3-201ENST00000622910 2331 ntBASIC16.24■□□□□ 0.19
CACNA2D1P54289 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 AC005229.1-201ENST00000392885 409 ntBASIC16.24■□□□□ 0.19
CACNA2D1P54289 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 BX539320.1-201ENST00000623759 877 ntBASIC16.24■□□□□ 0.19
CACNA2D1P54289 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 C18orf15-201ENST00000623680 2534 ntBASIC16.24■□□□□ 0.19
CACNA2D1P54289 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 PDIA3P1-201ENST00000471856 1510 ntBASIC16.24■□□□□ 0.19
CACNA2D1P54289 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CACNA2D1P54289 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CACNA2D1P54289 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CACNA2D1P54289 AC013268.4-201ENST00000637413 2228 ntBASIC16.23■□□□□ 0.19
CACNA2D1P54289 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CACNA2D1P54289 AC148477.4-201ENST00000613430 1793 ntBASIC16.23■□□□□ 0.19
CACNA2D1P54289 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.23■□□□□ 0.19
CACNA2D1P54289 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CACNA2D1P54289 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CACNA2D1P54289 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CACNA2D1P54289 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CACNA2D1P54289 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CACNA2D1P54289 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms