Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.89□□□□□ -0.19
GDF1P27539 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.89□□□□□ -0.19
GDF1P27539 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.89□□□□□ -0.19
GDF1P27539 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
GDF1P27539 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.88□□□□□ -0.19
GDF1P27539 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.88□□□□□ -0.19
GDF1P27539 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
GDF1P27539 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.88□□□□□ -0.19
GDF1P27539 AL139094.1-201ENST00000405549 1188 ntBASIC13.88□□□□□ -0.19
GDF1P27539 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 RPS2P32-201ENST00000439199 892 ntBASIC13.88□□□□□ -0.19
GDF1P27539 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.88□□□□□ -0.19
GDF1P27539 AC119751.2-201ENST00000504529 210 ntBASIC13.88□□□□□ -0.19
GDF1P27539 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.88□□□□□ -0.19
GDF1P27539 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.88□□□□□ -0.19
GDF1P27539 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.88□□□□□ -0.19
GDF1P27539 KRT90P-201ENST00000549264 1064 ntBASIC13.88□□□□□ -0.19
GDF1P27539 AC025279.2-201ENST00000569730 653 ntBASIC13.88□□□□□ -0.19
GDF1P27539 GNRHR2-203ENST00000581100 1187 ntBASIC13.88□□□□□ -0.19
GDF1P27539 MIR4259-201ENST00000584466 101 ntBASIC13.88□□□□□ -0.19
GDF1P27539 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
GDF1P27539 AC148477.4-201ENST00000613430 1793 ntBASIC13.88□□□□□ -0.19
GDF1P27539 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
GDF1P27539 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
GDF1P27539 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
GDF1P27539 AC132872.4-202ENST00000622924 2756 ntBASIC13.88□□□□□ -0.19
GDF1P27539 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
GDF1P27539 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.87□□□□□ -0.19
GDF1P27539 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.87□□□□□ -0.19
GDF1P27539 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.87□□□□□ -0.19
GDF1P27539 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.87□□□□□ -0.19
GDF1P27539 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.87□□□□□ -0.19
GDF1P27539 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.87□□□□□ -0.19
GDF1P27539 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
GDF1P27539 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.87□□□□□ -0.19
GDF1P27539 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GDF1P27539 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.87□□□□□ -0.19
GDF1P27539 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.87□□□□□ -0.19
GDF1P27539 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.87□□□□□ -0.19
GDF1P27539 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.87□□□□□ -0.19
GDF1P27539 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
GDF1P27539 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.87□□□□□ -0.19
GDF1P27539 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
GDF1P27539 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.87□□□□□ -0.19
GDF1P27539 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.87□□□□□ -0.19
GDF1P27539 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GDF1P27539 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.87□□□□□ -0.19
GDF1P27539 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
GDF1P27539 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.87□□□□□ -0.19
GDF1P27539 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
GDF1P27539 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.87□□□□□ -0.19
GDF1P27539 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GDF1P27539 AC097376.2-205ENST00000610159 5334 ntBASIC13.87□□□□□ -0.19
GDF1P27539 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms