Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
MSR1P21757 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
MSR1P21757 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MSR1P21757 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
MSR1P21757 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.57□□□□□ -0.24
MSR1P21757 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 CLK3P2-201ENST00000427566 1453 ntBASIC13.57□□□□□ -0.24
MSR1P21757 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
MSR1P21757 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.57□□□□□ -0.24
MSR1P21757 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.57□□□□□ -0.24
MSR1P21757 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.57□□□□□ -0.24
MSR1P21757 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.57□□□□□ -0.24
MSR1P21757 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
MSR1P21757 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
MSR1P21757 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.57□□□□□ -0.24
MSR1P21757 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
MSR1P21757 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MSR1P21757 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.56□□□□□ -0.24
MSR1P21757 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 REXO1L4P-201ENST00000605109 1937 ntBASIC13.56□□□□□ -0.24
MSR1P21757 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.56□□□□□ -0.24
MSR1P21757 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
MSR1P21757 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 SPDYE19P-201ENST00000338590 713 ntBASIC13.56□□□□□ -0.24
MSR1P21757 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MSR1P21757 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 FAM86LP-201ENST00000478302 853 ntBASIC13.56□□□□□ -0.24
MSR1P21757 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.56□□□□□ -0.24
MSR1P21757 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 RRP7BP-205ENST00000566851 833 ntBASIC13.56□□□□□ -0.24
MSR1P21757 SAMD11P1-201ENST00000571429 661 ntBASIC13.56□□□□□ -0.24
MSR1P21757 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.56□□□□□ -0.24
MSR1P21757 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MSR1P21757 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 AC009118.2-201ENST00000613275 655 ntBASIC13.56□□□□□ -0.24
MSR1P21757 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.56□□□□□ -0.24
MSR1P21757 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.56□□□□□ -0.24
MSR1P21757 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms