Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB4AP20338 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
RAB4AP20338 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.84□□□□□ -0.51
RAB4AP20338 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.84□□□□□ -0.51
RAB4AP20338 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
RAB4AP20338 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
RAB4AP20338 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
RAB4AP20338 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
RAB4AP20338 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC11.83□□□□□ -0.51
RAB4AP20338 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 AL353732.1-201ENST00000569618 1459 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 AC233702.3-201ENST00000578656 1387 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB4AP20338 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 AC126365.1-201ENST00000578585 1514 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB4AP20338 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 ABCD1P5-201ENST00000445663 754 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 AC087163.2-201ENST00000457299 853 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 AL671277.2-201ENST00000458060 996 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB4AP20338 AC087641.1-201ENST00000557561 1021 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 NTF6B-201ENST00000591913 560 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 AC064862.7-201ENST00000604520 867 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB4AP20338 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
RAB4AP20338 AC090616.6-203ENST00000579186 1945 ntBASIC11.83□□□□□ -0.52
RAB4AP20338 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
RAB4AP20338 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
RAB4AP20338 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB4AP20338 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB4AP20338 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB4AP20338 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RAB4AP20338 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RAB4AP20338 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 AC105250.1-201ENST00000509378 2057 ntBASIC11.82□□□□□ -0.52
RAB4AP20338 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB4AP20338 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.82□□□□□ -0.52
RAB4AP20338 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RAB4AP20338 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RAB4AP20338 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB4AP20338 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms