Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NCK1P16333 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.53□□□□□ -0.08
NCK1P16333 HIST3H2BA-201ENST00000436555 524 ntBASIC14.53□□□□□ -0.08
NCK1P16333 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 TARDBPP1-201ENST00000442013 1203 ntBASIC14.53□□□□□ -0.08
NCK1P16333 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.53□□□□□ -0.08
NCK1P16333 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.53□□□□□ -0.08
NCK1P16333 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.53□□□□□ -0.08
NCK1P16333 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.53□□□□□ -0.08
NCK1P16333 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.53□□□□□ -0.08
NCK1P16333 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.53□□□□□ -0.08
NCK1P16333 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.53□□□□□ -0.08
NCK1P16333 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.53□□□□□ -0.08
NCK1P16333 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.53□□□□□ -0.08
NCK1P16333 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NCK1P16333 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.53□□□□□ -0.08
NCK1P16333 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NCK1P16333 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.53□□□□□ -0.08
NCK1P16333 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NCK1P16333 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NCK1P16333 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.53□□□□□ -0.08
NCK1P16333 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NCK1P16333 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NCK1P16333 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NCK1P16333 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.52□□□□□ -0.08
NCK1P16333 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.52□□□□□ -0.08
NCK1P16333 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.52□□□□□ -0.08
NCK1P16333 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.52□□□□□ -0.08
NCK1P16333 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.52□□□□□ -0.08
NCK1P16333 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.52□□□□□ -0.08
NCK1P16333 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.52□□□□□ -0.08
NCK1P16333 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NCK1P16333 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
NCK1P16333 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
NCK1P16333 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
NCK1P16333 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.52□□□□□ -0.09
NCK1P16333 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.52□□□□□ -0.09
NCK1P16333 AL662844.1-201ENST00000546340 181 ntBASIC14.52□□□□□ -0.09
NCK1P16333 RARRES2P9-201ENST00000565168 469 ntBASIC14.52□□□□□ -0.09
NCK1P16333 AC026120.1-201ENST00000611536 926 ntBASIC14.52□□□□□ -0.09
NCK1P16333 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.52□□□□□ -0.09
NCK1P16333 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.52□□□□□ -0.09
NCK1P16333 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.52□□□□□ -0.09
NCK1P16333 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NCK1P16333 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NCK1P16333 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.52□□□□□ -0.09
NCK1P16333 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
NCK1P16333 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NCK1P16333 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NCK1P16333 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.52□□□□□ -0.09
NCK1P16333 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NCK1P16333 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.52□□□□□ -0.09
NCK1P16333 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms