Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
DEFA4P12838 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 AC004461.1-201ENST00000412461 403 ntBASIC12.55□□□□□ -0.4
DEFA4P12838 AL627223.1-201ENST00000416693 442 ntBASIC12.55□□□□□ -0.4
DEFA4P12838 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 UPF3AP3-201ENST00000420996 769 ntBASIC12.55□□□□□ -0.4
DEFA4P12838 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 AP000347.1-202ENST00000435868 847 ntBASIC12.55□□□□□ -0.4
DEFA4P12838 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 PHKG1P2-201ENST00000457537 863 ntBASIC12.55□□□□□ -0.4
DEFA4P12838 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
DEFA4P12838 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.55□□□□□ -0.4
DEFA4P12838 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
DEFA4P12838 AL671883.3-201ENST00000603274 991 ntBASIC12.55□□□□□ -0.4
DEFA4P12838 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.55□□□□□ -0.4
DEFA4P12838 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 INTS4P1-203ENST00000641008 3683 ntBASIC12.55□□□□□ -0.4
DEFA4P12838 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.55□□□□□ -0.4
DEFA4P12838 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.55□□□□□ -0.4
DEFA4P12838 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.55□□□□□ -0.4
DEFA4P12838 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
DEFA4P12838 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
DEFA4P12838 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA4P12838 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA4P12838 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA4P12838 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA4P12838 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DEFA4P12838 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DEFA4P12838 AC087386.2-201ENST00000623212 4637 ntBASIC12.54□□□□□ -0.4
DEFA4P12838 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.54□□□□□ -0.4
DEFA4P12838 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
DEFA4P12838 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
DEFA4P12838 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.54□□□□□ -0.4
DEFA4P12838 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.54□□□□□ -0.4
DEFA4P12838 AC112482.1-201ENST00000492080 688 ntBASIC12.54□□□□□ -0.4
DEFA4P12838 YBX1P5-201ENST00000509441 847 ntBASIC12.54□□□□□ -0.4
DEFA4P12838 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.54□□□□□ -0.4
DEFA4P12838 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.54□□□□□ -0.4
DEFA4P12838 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 SNHG9-202ENST00000564014 471 ntBASIC12.54□□□□□ -0.4
DEFA4P12838 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.54□□□□□ -0.4
DEFA4P12838 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.54□□□□□ -0.4
DEFA4P12838 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
DEFA4P12838 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
DEFA4P12838 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
DEFA4P12838 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
DEFA4P12838 AJ011931.1-201ENST00000618749 2492 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms