Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBP1P09455 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.14■□□□□ 0.01
RBP1P09455 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
RBP1P09455 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RBP1P09455 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.13■□□□□ 0.01
RBP1P09455 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.13■□□□□ 0.01
RBP1P09455 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.13■□□□□ 0.01
RBP1P09455 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.13■□□□□ 0.01
RBP1P09455 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RBP1P09455 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.13■□□□□ 0.01
RBP1P09455 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.13■□□□□ 0.01
RBP1P09455 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.13■□□□□ 0.01
RBP1P09455 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.13■□□□□ 0.01
RBP1P09455 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.13■□□□□ 0.01
RBP1P09455 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 AC092865.5-201ENST00000545435 363 ntBASIC15.13■□□□□ 0.01
RBP1P09455 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.13■□□□□ 0.01
RBP1P09455 AC027612.4-201ENST00000605371 583 ntBASIC15.13■□□□□ 0.01
RBP1P09455 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
RBP1P09455 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.13■□□□□ 0.01
RBP1P09455 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RBP1P09455 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RBP1P09455 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.13■□□□□ 0.01
RBP1P09455 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 SNX18-202ENST00000343017 3140 ntBASIC15.13■□□□□ 0.01
RBP1P09455 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.13■□□□□ 0.01
RBP1P09455 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
RBP1P09455 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 TUBB3P1-201ENST00000405796 1332 ntBASIC15.13■□□□□ 0.01
RBP1P09455 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBP1P09455 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.12■□□□□ 0.01
RBP1P09455 INTS4P1-203ENST00000641008 3683 ntBASIC15.12■□□□□ 0.01
RBP1P09455 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.12■□□□□ 0.01
RBP1P09455 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RBP1P09455 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.12■□□□□ 0.01
RBP1P09455 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RBP1P09455 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.12■□□□□ 0.01
RBP1P09455 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RBP1P09455 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RBP1P09455 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RBP1P09455 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.12■□□□□ 0.01
RBP1P09455 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.12■□□□□ 0.01
RBP1P09455 AC109322.1-201ENST00000524499 1264 ntBASIC15.12■□□□□ 0.01
RBP1P09455 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RBP1P09455 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.12■□□□□ 0.01
RBP1P09455 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.12■□□□□ 0.01
RBP1P09455 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.12■□□□□ 0.01
RBP1P09455 SAMD11P1-201ENST00000571429 661 ntBASIC15.12■□□□□ 0.01
RBP1P09455 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.12■□□□□ 0.01
RBP1P09455 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RBP1P09455 AC134684.3-201ENST00000641758 218 ntBASIC15.12■□□□□ 0.01
RBP1P09455 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.12■□□□□ 0.01
RBP1P09455 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 AC087499.5-201ENST00000452760 1342 ntBASIC15.12■□□□□ 0.01
RBP1P09455 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.12■□□□□ 0.01
RBP1P09455 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.12■□□□□ 0.01
RBP1P09455 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RBP1P09455 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 AC018442.1-201ENST00000421439 2061 ntBASIC15.12■□□□□ 0.01
RBP1P09455 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBP1P09455 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBP1P09455 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBP1P09455 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBP1P09455 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBP1P09455 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBP1P09455 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RBP1P09455 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RBP1P09455 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RBP1P09455 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms