Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
THBS1P07996 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.14□□□□□ -0.15
THBS1P07996 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.14□□□□□ -0.15
THBS1P07996 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
THBS1P07996 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.14□□□□□ -0.15
THBS1P07996 C8orf49-201ENST00000525043 1968 ntBASIC14.14□□□□□ -0.15
THBS1P07996 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
THBS1P07996 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.14□□□□□ -0.15
THBS1P07996 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.14□□□□□ -0.15
THBS1P07996 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
THBS1P07996 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
THBS1P07996 AL365209.1-201ENST00000624418 6473 ntBASIC14.13□□□□□ -0.15
THBS1P07996 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 LILRP1-201ENST00000444199 1370 ntBASIC14.13□□□□□ -0.15
THBS1P07996 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
THBS1P07996 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
THBS1P07996 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
THBS1P07996 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 AC236430.1-201ENST00000402231 743 ntBASIC14.13□□□□□ -0.15
THBS1P07996 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.13□□□□□ -0.15
THBS1P07996 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.13□□□□□ -0.15
THBS1P07996 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.13□□□□□ -0.15
THBS1P07996 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.13□□□□□ -0.15
THBS1P07996 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.13□□□□□ -0.15
THBS1P07996 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.13□□□□□ -0.15
THBS1P07996 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.13□□□□□ -0.15
THBS1P07996 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.13□□□□□ -0.15
THBS1P07996 RARRES2P5-201ENST00000564013 466 ntBASIC14.13□□□□□ -0.15
THBS1P07996 AC008738.7-201ENST00000609744 511 ntBASIC14.13□□□□□ -0.15
THBS1P07996 AC004840.1-201ENST00000636359 365 ntBASIC14.13□□□□□ -0.15
THBS1P07996 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
THBS1P07996 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
THBS1P07996 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.13□□□□□ -0.15
THBS1P07996 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
THBS1P07996 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
THBS1P07996 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 CICP14-201ENST00000629111 2732 ntBASIC14.13□□□□□ -0.15
THBS1P07996 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
THBS1P07996 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.12□□□□□ -0.15
THBS1P07996 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.12□□□□□ -0.15
THBS1P07996 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.12□□□□□ -0.15
THBS1P07996 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
THBS1P07996 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
THBS1P07996 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.12□□□□□ -0.15
THBS1P07996 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
THBS1P07996 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.12□□□□□ -0.15
THBS1P07996 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.12□□□□□ -0.15
THBS1P07996 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.12□□□□□ -0.15
THBS1P07996 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms