Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.28■□□□□ 0.04
CAPNS1P04632 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CAPNS1P04632 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CAPNS1P04632 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CAPNS1P04632 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CAPNS1P04632 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CAPNS1P04632 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CAPNS1P04632 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPNS1P04632 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPNS1P04632 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CAPNS1P04632 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.27■□□□□ 0.04
CAPNS1P04632 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CAPNS1P04632 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPNS1P04632 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CAPNS1P04632 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPNS1P04632 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPNS1P04632 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.27■□□□□ 0.04
CAPNS1P04632 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPNS1P04632 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPNS1P04632 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPNS1P04632 TIMM17BP1-201ENST00000545713 516 ntBASIC15.27■□□□□ 0.04
CAPNS1P04632 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPNS1P04632 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPNS1P04632 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPNS1P04632 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.27■□□□□ 0.04
CAPNS1P04632 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 AL365330.1-201ENST00000607459 531 ntBASIC15.27■□□□□ 0.04
CAPNS1P04632 CU634019.7-201ENST00000624153 1185 ntBASIC15.27■□□□□ 0.04
CAPNS1P04632 FP236241.2-201ENST00000624906 1185 ntBASIC15.27■□□□□ 0.04
CAPNS1P04632 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CAPNS1P04632 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CAPNS1P04632 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPNS1P04632 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPNS1P04632 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.27■□□□□ 0.03
CAPNS1P04632 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPNS1P04632 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPNS1P04632 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPNS1P04632 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.27■□□□□ 0.03
CAPNS1P04632 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.27■□□□□ 0.03
CAPNS1P04632 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPNS1P04632 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CAPNS1P04632 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPNS1P04632 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CAPNS1P04632 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CAPNS1P04632 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPNS1P04632 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPNS1P04632 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms