Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.07■□□□□ 0.16
ERBB2P04626 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
ERBB2P04626 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERBB2P04626 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERBB2P04626 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.06■□□□□ 0.16
ERBB2P04626 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ERBB2P04626 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 CICP23-201ENST00000605013 2741 ntBASIC16.06■□□□□ 0.16
ERBB2P04626 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ERBB2P04626 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.06■□□□□ 0.16
ERBB2P04626 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.06■□□□□ 0.16
ERBB2P04626 AL137783.1-201ENST00000623494 1896 ntBASIC16.06■□□□□ 0.16
ERBB2P04626 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.06■□□□□ 0.16
ERBB2P04626 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ERBB2P04626 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ERBB2P04626 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ERBB2P04626 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 AL139094.1-201ENST00000405549 1188 ntBASIC16.06■□□□□ 0.16
ERBB2P04626 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.06■□□□□ 0.16
ERBB2P04626 AL162726.2-201ENST00000438986 1017 ntBASIC16.06■□□□□ 0.16
ERBB2P04626 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.06■□□□□ 0.16
ERBB2P04626 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ERBB2P04626 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.06■□□□□ 0.16
ERBB2P04626 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.06■□□□□ 0.16
ERBB2P04626 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.06■□□□□ 0.16
ERBB2P04626 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.06■□□□□ 0.16
ERBB2P04626 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.06■□□□□ 0.16
ERBB2P04626 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.06■□□□□ 0.16
ERBB2P04626 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ERBB2P04626 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ERBB2P04626 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 FGD5P1-202ENST00000614866 2498 ntBASIC16.06■□□□□ 0.16
ERBB2P04626 AC013726.1-201ENST00000563747 2285 ntBASIC16.06■□□□□ 0.16
ERBB2P04626 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERBB2P04626 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 MSTO2P-201ENST00000314835 1709 ntBASIC16.05■□□□□ 0.16
ERBB2P04626 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ERBB2P04626 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
ERBB2P04626 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.05■□□□□ 0.16
ERBB2P04626 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ERBB2P04626 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 NUS1P3-201ENST00000423502 862 ntBASIC16.05■□□□□ 0.16
ERBB2P04626 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ERBB2P04626 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ERBB2P04626 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.05■□□□□ 0.16
ERBB2P04626 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.05■□□□□ 0.16
ERBB2P04626 AP005018.1-201ENST00000525475 301 ntBASIC16.05■□□□□ 0.16
ERBB2P04626 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.05■□□□□ 0.16
ERBB2P04626 ENPP7P5-201ENST00000541031 1031 ntBASIC16.05■□□□□ 0.16
ERBB2P04626 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.05■□□□□ 0.16
ERBB2P04626 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.05■□□□□ 0.16
ERBB2P04626 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.05■□□□□ 0.16
ERBB2P04626 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ERBB2P04626 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.05■□□□□ 0.16
ERBB2P04626 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ERBB2P04626 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ERBB2P04626 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.05■□□□□ 0.16
ERBB2P04626 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.05■□□□□ 0.16
ERBB2P04626 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERBB2P04626 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERBB2P04626 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERBB2P04626 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
ERBB2P04626 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms