Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX2-2O95096 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX2-2O95096 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NKX2-2O95096 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
NKX2-2O95096 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NKX2-2O95096 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX2-2O95096 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX2-2O95096 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 RNU1-114P-201ENST00000365297 166 ntBASIC14.1□□□□□ -0.15
NKX2-2O95096 ACKR1-201ENST00000368121 1240 ntBASIC14.1□□□□□ -0.15
NKX2-2O95096 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.1□□□□□ -0.15
NKX2-2O95096 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX2-2O95096 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NKX2-2O95096 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.1□□□□□ -0.15
NKX2-2O95096 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.1□□□□□ -0.15
NKX2-2O95096 DUX4L47-201ENST00000566374 394 ntBASIC14.1□□□□□ -0.15
NKX2-2O95096 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.1□□□□□ -0.15
NKX2-2O95096 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.1□□□□□ -0.15
NKX2-2O95096 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NKX2-2O95096 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX2-2O95096 AC092364.2-202ENST00000597012 1073 ntBASIC14.1□□□□□ -0.15
NKX2-2O95096 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX2-2O95096 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NKX2-2O95096 AP005019.2-201ENST00000615104 511 ntBASIC14.1□□□□□ -0.15
NKX2-2O95096 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.1□□□□□ -0.15
NKX2-2O95096 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX2-2O95096 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX2-2O95096 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX2-2O95096 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 AL137783.1-201ENST00000623494 1896 ntBASIC14.1□□□□□ -0.15
NKX2-2O95096 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-2O95096 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NKX2-2O95096 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX2-2O95096 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX2-2O95096 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
NKX2-2O95096 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX2-2O95096 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX2-2O95096 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX2-2O95096 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 DGCR5-201ENST00000399539 862 ntBASIC14.09□□□□□ -0.15
NKX2-2O95096 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.09□□□□□ -0.15
NKX2-2O95096 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.09□□□□□ -0.15
NKX2-2O95096 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 AP001063.1-201ENST00000568332 529 ntBASIC14.09□□□□□ -0.15
NKX2-2O95096 CLUHP6-201ENST00000580789 941 ntBASIC14.09□□□□□ -0.15
NKX2-2O95096 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.09□□□□□ -0.15
NKX2-2O95096 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX2-2O95096 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NKX2-2O95096 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX2-2O95096 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NKX2-2O95096 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.09□□□□□ -0.15
NKX2-2O95096 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NKX2-2O95096 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms