Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLSTN1O94985 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.07■□□□□ 0.32
CLSTN1O94985 AC087499.5-201ENST00000452760 1342 ntBASIC17.07■□□□□ 0.32
CLSTN1O94985 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.07■□□□□ 0.32
CLSTN1O94985 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLSTN1O94985 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.07■□□□□ 0.32
CLSTN1O94985 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.07■□□□□ 0.32
CLSTN1O94985 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.07■□□□□ 0.32
CLSTN1O94985 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.07■□□□□ 0.32
CLSTN1O94985 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.07■□□□□ 0.32
CLSTN1O94985 AC010336.2-201ENST00000564226 506 ntBASIC17.07■□□□□ 0.32
CLSTN1O94985 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.07■□□□□ 0.32
CLSTN1O94985 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.07■□□□□ 0.32
CLSTN1O94985 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLSTN1O94985 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLSTN1O94985 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.07■□□□□ 0.32
CLSTN1O94985 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLSTN1O94985 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
CLSTN1O94985 AC022144.1-201ENST00000602255 1580 ntBASIC17.06■□□□□ 0.32
CLSTN1O94985 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.06■□□□□ 0.32
CLSTN1O94985 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.06■□□□□ 0.32
CLSTN1O94985 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.06■□□□□ 0.32
CLSTN1O94985 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLSTN1O94985 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.06■□□□□ 0.32
CLSTN1O94985 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLSTN1O94985 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.06■□□□□ 0.32
CLSTN1O94985 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.06■□□□□ 0.32
CLSTN1O94985 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.06■□□□□ 0.32
CLSTN1O94985 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLSTN1O94985 AC135586.1-201ENST00000539323 574 ntBASIC17.06■□□□□ 0.32
CLSTN1O94985 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.06■□□□□ 0.32
CLSTN1O94985 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.06■□□□□ 0.32
CLSTN1O94985 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLSTN1O94985 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
CLSTN1O94985 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLSTN1O94985 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.06■□□□□ 0.32
CLSTN1O94985 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLSTN1O94985 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.06■□□□□ 0.32
CLSTN1O94985 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 SON-203ENST00000381679 7860 ntTSL 5 BASIC17.06■□□□□ 0.32
CLSTN1O94985 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC17.06■□□□□ 0.32
CLSTN1O94985 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLSTN1O94985 AL607033.1-201ENST00000623900 1599 ntBASIC17.06■□□□□ 0.32
CLSTN1O94985 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CLSTN1O94985 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.06■□□□□ 0.32
CLSTN1O94985 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLSTN1O94985 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.05■□□□□ 0.32
CLSTN1O94985 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.05■□□□□ 0.32
CLSTN1O94985 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.05■□□□□ 0.32
CLSTN1O94985 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.05■□□□□ 0.32
CLSTN1O94985 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLSTN1O94985 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.05■□□□□ 0.32
CLSTN1O94985 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.05■□□□□ 0.32
CLSTN1O94985 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.05■□□□□ 0.32
CLSTN1O94985 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.05■□□□□ 0.32
CLSTN1O94985 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.05■□□□□ 0.32
CLSTN1O94985 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.05■□□□□ 0.32
CLSTN1O94985 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.05■□□□□ 0.32
CLSTN1O94985 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
CLSTN1O94985 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CLSTN1O94985 HNRNPUP1-201ENST00000554987 333 ntBASIC17.05■□□□□ 0.32
CLSTN1O94985 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.05■□□□□ 0.32
CLSTN1O94985 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLSTN1O94985 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLSTN1O94985 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.05■□□□□ 0.32
CLSTN1O94985 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.05■□□□□ 0.32
CLSTN1O94985 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms